FSML
latest
Contents:
Introduction
Usage
moments-learning
FSML
Index
Edit on GitHub
Index
A
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
K
|
L
|
M
|
N
|
O
|
P
|
R
|
S
|
T
|
W
|
X
A
abs_tolerance (fsml.simulate.simulate.TaskConfiguration attribute)
add_amount_species() (in module fsml.simulate.transform)
automatic_step_size (fsml.simulate.simulate.TaskConfiguration attribute)
C
collate() (in module fsml.learn.data_management.dataloader)
compute_accuracy() (in module fsml.utils)
compute_percent() (in module fsml.utils)
CONVERSION_ERROR (fsml.utils.Errors attribute)
convert_models() (in module fsml.simulate.transform)
convert_one() (in module fsml.simulate.transform)
count_folder_elements() (in module fsml.utils)
count_parameters() (fsml.learn.models.mlp.FSML_MLP_Predictor method)
create_report() (in module fsml.simulate.simulate)
D
data_path (fsml.simulate.simulate.TaskConfiguration attribute)
download_model() (in module fsml.utils)
E
Errors (class in fsml.utils)
evaluate() (in module fsml.utils)
F
FILE_NOT_EXISTS (fsml.utils.Errors attribute)
find_indexes() (in module fsml.utils)
forward() (fsml.learn.models.mlp.FSML_MLP_Predictor method)
fsml
module
fsml.learn
module
fsml.learn.config
module
fsml.learn.data_management
module
fsml.learn.data_management.dataloader
module
fsml.learn.data_management.dataset
module
fsml.learn.models
module
fsml.learn.models.mlp
module
fsml.learn.reverse
module
fsml.learn.test
module
fsml.learn.train
module
fsml.simulate
module
fsml.simulate.main
module
fsml.simulate.simulate
module
fsml.simulate.transform
module
fsml.utils
module
FSML_MLP_Predictor (class in fsml.learn.models.mlp)
FSMLDataLoader (class in fsml.learn.data_management.dataloader)
FSMLMeanStdDataset (class in fsml.learn.data_management.dataset)
FSMLOneMeanStdDataset (class in fsml.learn.data_management.dataset)
G
gen_time_series (fsml.simulate.simulate.TaskConfiguration attribute)
generate() (fsml.simulate.simulate.ParameterSampler method)
generate_default_configuration() (in module fsml.simulate.simulate)
generate_default_param_sampler_configuration() (in module fsml.simulate.simulate)
generate_taskid() (in module fsml.simulate.simulate)
get_dataset_by_indices() (in module fsml.learn.data_management.dataset)
get_mean_std() (in module fsml.utils)
get_model() (fsml.simulate.simulate.TrajectoryTask method)
get_ranges() (in module fsml.learn.reverse)
(in module fsml.utils)
get_used_parameters() (fsml.simulate.simulate.TrajectoryTask method)
H
handle_run_errors() (in module fsml.utils)
handle_sbml_errors() (in module fsml.utils)
I
initial_time (fsml.simulate.simulate.TaskConfiguration attribute)
K
KFoldCrossValidationWrapper (class in fsml.learn.train)
kFoldValidation() (fsml.learn.train.KFoldCrossValidationWrapper static method)
L
load_model() (fsml.simulate.simulate.TrajectoryTask method)
(in module fsml.utils)
load_report() (in module fsml.utils)
load_sbml() (in module fsml.utils)
M
module
fsml
fsml.learn
fsml.learn.config
fsml.learn.data_management
fsml.learn.data_management.dataloader
fsml.learn.data_management.dataset
fsml.learn.models
fsml.learn.models.mlp
fsml.learn.reverse
fsml.learn.test
fsml.learn.train
fsml.simulate
fsml.simulate.main
fsml.simulate.simulate
fsml.simulate.transform
fsml.utils
N
normalize() (in module fsml.utils)
O
output_event (fsml.simulate.simulate.TaskConfiguration attribute)
P
ParameterSampler (class in fsml.simulate.simulate)
ParameterSamplerConfiguration (class in fsml.simulate.simulate)
percentage_of_change (fsml.simulate.simulate.ParameterSamplerConfiguration attribute)
perform_grid_search() (in module fsml.learn.reverse)
perform_random_search() (in module fsml.learn.reverse)
plot() (fsml.learn.train.Trainer method)
(in module fsml.utils)
print_dict() (in module fsml.utils)
print_errors() (in module fsml.utils)
print_informations() (fsml.simulate.simulate.TrajectoryTask method)
print_parameters() (in module fsml.utils)
print_results() (fsml.simulate.simulate.TrajectoryTask method)
print_species() (in module fsml.utils)
R
read_csv_content() (in module fsml.utils)
read_paths_file() (in module fsml.utils)
rel_tolerance (fsml.simulate.simulate.TaskConfiguration attribute)
remove_original() (in module fsml.utils)
report_fixed_species (fsml.simulate.simulate.TaskConfiguration attribute)
report_out_stype (fsml.simulate.simulate.TaskConfiguration attribute)
run() (fsml.learn.train.Trainer method)
(fsml.simulate.simulate.TrajectoryTask method)
run_one() (in module fsml.simulate.simulate)
run_simulations() (in module fsml.simulate.simulate)
run_task() (fsml.simulate.simulate.TrajectoryTask method)
S
save_model() (in module fsml.learn.reverse)
(in module fsml.utils)
sbml_to_raterules() (in module fsml.simulate.transform)
select_data() (in module fsml.utils)
setup_kFold_validation() (fsml.learn.train.KFoldCrossValidationWrapper static method)
setup_seed() (in module fsml.utils)
setup_task() (fsml.simulate.simulate.TrajectoryTask method)
sim_horizon (fsml.simulate.simulate.TaskConfiguration attribute)
split() (in module fsml.learn.reverse)
step_size (fsml.simulate.simulate.TaskConfiguration attribute)
T
TaskConfiguration (class in fsml.simulate.simulate)
test() (fsml.learn.data_management.dataset.FSMLMeanStdDataset method)
(fsml.learn.data_management.dataset.FSMLOneMeanStdDataset method)
(fsml.learn.test.Tester method)
(in module fsml.learn.test)
Tester (class in fsml.learn.test)
to_integral() (in module fsml.utils)
to_string() (in module fsml.utils)
total_number_of_sample (fsml.simulate.simulate.ParameterSamplerConfiguration attribute)
total_sample_per_param (fsml.simulate.simulate.ParameterSamplerConfiguration attribute)
train() (in module fsml.learn.train)
train_and_test() (in module fsml.learn.reverse)
Trainer (class in fsml.learn.train)
TrajectoryTask (class in fsml.simulate.simulate)
transform() (in module fsml.simulate.transform)
transform_and_simulate() (in module fsml.simulate.main)
transform_and_simulate_one() (in module fsml.simulate.main)
transform_model() (in module fsml.simulate.transform)
W
write_paths() (in module fsml.utils)
X
XML_READ_ERROR (fsml.utils.Errors attribute)
Read the Docs
v: latest
Versions
latest
Downloads
On Read the Docs
Project Home
Builds